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Title
Technical note: Genetic principal component models for multitrait single-step genomic evaluation
Fields of Research (FoR) 2008:
Author(s)
Publication Date
2015
Socio-Economic Objective (SEO) 2008
Abstract
A reparameterization of the multivariate linear mixed model in genetic evaluation to principal components is described. This yields an equivalent model with a sparser coefficient matrix in the mixed model equations and, thus, reduced computational requirements to solve them. It is especially advantageous for analyses incorporating genomic relationship information with many nonzero elements in the inverse of the relationship matrix. Moreover, the framework lends itself directly to dimension reduction and, thus, further computational savings by omitting genetic principal components with negligible eigenvalues. The potential impact on computational demands is illustrated for an application to single-step genomic evaluation of Australian sheep.
Publication Type
Journal Article
Source of Publication
Journal of Animal Science, 93(10), p. 4624-4628
Publisher
American Society of Animal Science
Place of Publication
United States of America
ISSN
1525-3163
0021-8812
Fields of Research (FoR) 2020
Socio-Economic Objective (SEO) 2020
Peer Reviewed
Yes
HERDC Category Description
Peer Reviewed
Yes
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