Ruminant productivity in the tropical Africa has remained low despite decades of research on animal nutrition and introduction of new breeds of animals mainly because oflow-quality feeds available, especially during the dry season that is inefficiently utilised. This results in prolonged time for animals to mature and increased nutrient excretion to the environment.We conducted a study using yearling steers (n = 12, live weight (LW) = 161.8± 10.89 kg) in a 3 · 3 Latin square to evaluate the effect of protein supplementation and supplementation frequency on intake, digestibility, nitrogen (N) retention and microbial N supply in cattle consuming low-protein diets. The steers were maintained on ad libitum wheat straw (DM = 877± 5 g/kg, crude protein (CP) = 20.0 ± 1.1 g/kg), with supplemental protein supplied as air-dried Calliandra calothyrsus leaves (DM = 897 ± 3 g/kg, CP = 257.5 ± 4.1 g/kg on a DM basis). Samples of basal diet, supplement, refusals, faecal matter and urine were collected and analysed per treatment. Supplementation increased intakes by the steers (P < 0.001), with no difference between the two supplementation frequencies (P > 0.404). Steers lost bodyweight (P < 0.05) on all treatments, but less so when supplemented. Nitrogen losses was reduced (P < 0.001) with supplementation (–33.3% vs 15.7%, s.e.m. 0.06). The increased N balance in animals receiving supplemented diets indicated that N retention actually improves with increased protein supplementation in animals fed low-protein diets, implying that improving protein supply to animals fed submaintenance diets will not only ameliorate production losses, but will actually decrease non-enteric greenhouse gas production and environmental N losses per animal product unit obtained.

Greenhouse gas (GHG) emission measurements from livestock excreta in Africa are limited. We measured CH₄ and N₂O emissions from excreta of six Boran (Bos indicus) and six Friesian (Bos taurus)steers near Nairobi, Kenya. The steers were fed one of three diets (T1 [chaffed wheat straw], T2 [T1 + Calliandra calothyrsusMeissner – 0.2% live weight per day], and T3 [T1 + calliandra –0.4% live weight every 2 d]). The T1 diet is similar in quality to typical diets in the region. Calliandra is a leguminous fodder tree promoted as a feed supplement. Fresh feces and urine were applied to grasslands and emissions measured using static chambers. Cumulative 28-d fecal emissions were 302 ± 52.4 and95 ± 13.8 mg CH 4–C kg^-1 dry matter for Friesen and Boran steers, respectively, and 11.5 ± 4.26 and 24.7 ± 8.32 mg N₂O–N kg^-1 dry matter for Friesian and Boran steers, respectively. For urine fromFriesian steers, the N₂O emissions were 2.8 ± 0.64 mg N₂O–N 100mL urine-1. The CH₄ emission factors (EFs) (246 ± 49.5 and 87 ± 12.7g CH 4–C yr^-1 animal^-1 for Friesan and Boran, respectively) were lower than the International Panel on Climate Change EFs (750 gCH 4–C animal^-1 yr^-1), whereas the N2O EFs (0.1 and 0.2% for the Friesian and Boran feces, respectively, and 1.2% for urine) were also lower than International Panel on Climate Change estimates.The low N content of the excreta likely caused the low emissions and indicates that current models probably overestimate CH₄ and N₂O emissions from African livestock manure.

Given their high nitrogen (N) concentration and low costs, sweet potato vine silage (SPVS) and urea-molasses blocks (UMB) are recommended supplements for tropical regions; therefore, they were investigated in this study. Six heifers were allocated to three diets: the roughage diet (R) consisted of wheat straw (0.61) and Rhodes grass hay (0.39; on dry matter (DM) basis); R + SPVS combined R (0.81) and SPVS (0.19); and with R + UMB animals had access to UMB. During two experimental periods, feed intake, feces and urine excretion, digesta passage, and rumen microbial protein synthesis were determined during seven days and methane emissions during three days. There was no treatment effect (p > 0.05) on DM and N intake. Apparent DM digestibility of R + SPVS (510 g/kg) was higher (p < 0.05) than of R (474 g/kg). Digesta passage and duodenal microbial N flow were similar for all diets (p > 0.05), while N retention was highest with R + SPVS (p > 0.05). Methane emissions per unit of digested feed (g CH₄/kg dDM) were lower (p < 0.05) for R + SPVS (55.2) than for R (64.7). Hence, SPVS supplementation to poor–quality roughage has the potential to increase diet digestibility and N retention while reducing CH₄ emissions.

Background:The Boran (Bos indicus), indigenous Zebu cattle breed from subSaharan Africa, is remarkably well adapted to harsh tropical environments. Due to financial constraints and low-quality forage, African livestock are rarely fed at 100% maintenance energy requirements (MER) and the effect of sub-optimal restricted feeding on the rumen microbiome of African Zebu cattle remains largely unexplored. We collected 24 rumen fluid samples from six Boran cattle fed at suboptimal and optimal MER levels and characterised their rumen microbial composition by performing shotgun metagenomics and de novo assembly of metagenome-assembled genomes (MAGs). These MAGs were used as reference database to investigate the effect of diet restriction on the composition and functional potential of the rumen microbiome of African cattle.

Results: We report 1200 newly discovered MAGs from the rumen of Boran cattle. A total of 850 were dereplicated, and their uniqueness confirmed with pairwise comparisons (based on Mash distances) between African MAGs and other publicly available genomes from the rumen. A genome-centric investigation into sub-optimal diets highlighted a statistically significant effect on rumen microbial abundance profiles and a previously unobserved relationship between whole microbiome shifts in functional potential and taxon-level associations in metabolic pathways.

Conclusions: This study is the first to identify 1200 high-quality African rumen specific MAGs and provides further insight into the rumen function in harsh environments with food scarcity. The genomic information from the rumen microbiome of an indigenous African cattle breed sheds light on the microbiome contribution to rumen functionality and constitutes a vital resource in addressing food security in developing countries.